Software

Software packages developed by Banabithi Bose

GitHub - boseb/CTDPathSim2.0: An R package for computing the similarity scores between patient tumor samples and cancer cell lines at genetic, genomic, and epigenetic levels integrating multi-omics datasets.An R package for computing the similarity scores between patient tumor samples and cancer cell lines at genetic, genomic, and epigenetic levels integrating multi-omics datasets. - GitHub - boseb/CT...

GitHub - bozdaglab/miRDriver: A computational tool to infer copy number derived miRNA-gene networks in cancer.A computational tool to infer copy number derived miRNA-gene networks in cancer. - GitHub - bozdaglab/miRDriver: A computational tool to infer copy number derived miRNA-gene networks in cancer.

Coming soon:

PDDRNet-MH

An R package for patient-specific drug response integrating high-throughput genomic and genetic datasets.

Coming soon:

GXwasR

An R package that applies various models of sex-dependent genetic effects using statistical genetics and genome-wide analyses.

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